ALPS — Acer AR585 F1 Cluster

Detail
| Machine Name | ALPS — Acer AR585 F1 Cluster |
|---|---|
| Machine Structure | SMP Cluster |
| Hostname | apls |
| Installing Time | 2011/05 |
| Field | genernal-purpose |
| Installing Software | ABINIT, Amber, CASINO, CHARMM, Chemsoft, CPMD, DL_POLY, GAMESS, Gaussian, GROMACS, Molpro, NAMD, NWChem, octopus, OpenMX, Quantum ESPRESSO, siesta, VASP, WIEN2k |
Technical Specs
ALPS is short for “Advanced Large-scale Parallel Supercluster” (also known as “御風者” in Chinese). It is a supercomputer that offers an aggregate performance of over 177 TFLOPS. The system uses the AMDR Opteron 6100 processors, and has a total of 8 compute clusters, 1 large memory cluster, and over 25,600 compute cores.
ALPS is designed to support a wide range of applications — so many that NCHC could only begin to fathom the jobs that could potentially be run across it. APLS is also designed to function as a test bed for new application design and research; support for open source and academic-specific applications is a must. To offer the most robust level of support, the system was first planned with every angle in mind — not simply raw compute performance, and not necessarily best performance per watt.
> Configuration
-
System in Brief
- Hostname:
- alps.nchc.org.tw
- Login Node:
- alps.nchc.org.tw
- Interactive Nodes :
- alpi1.nchc.org.tw (211.73.70.21)
- alpi2.nchc.org.tw (211.73.70.22)
- alpi3.nchc.org.tw (211.73.70.23)
- alpi4.nchc.org.tw (211.73.70.24)
- alpi5.nchc.org.tw (211.73.70.25)
- Directories:
- /home (209 TB), for user's home
- /pkg (16 TB), for package
- /work (162 TB), for working scratch
-
Hardware Specification
- System Family:
- Acer Group Cluster
- System Model:
- Acer AR585 F1 Cluster
- Processors:
- AMD Opteron 6174, 12 cores, 2.2GHz (compute nodes)
- AMD Opteron 6136, 8 cores, 2.4GHz (fat nodes)
- Main Memory (per node):
- 128 GB (compute nodes)
- 256 GB (fat nodes)
-
Software Stack
- Operating System:
- Novell SuSE Linux Enterprise 11 SP1
- Job Scheduler & Queuing System:
- Platform LSF (Load Sharing Facility) 7.06
- Parallel Filesystem:
- Lustre
- Development Tools:
- Compiler:
- Intel Cluster Toolkit, PGI CDK/Server, x86 Open64, GCC
- Debugger:
- Allinea DDT
- Libraries:
- MPI/OpenMP:
- Platform MPI (formerly HP-MPI), Intel MPI, PGI MPI/OpenMP, MVAPICH/MVAPICH2
- Math:
- Intel MKL (Math Kernel Library), AMD ACML (AMD Coe Math Library)
> Queuing System
NCHC users specify one of the following submit classes to queue jobs. Upon submission the job is routed to the appropriate LSF class according to the following criteria.
| Queue Name | CPU(s)/job | Max CPUs/user | (CPU/Run)time limit/job |
|---|---|---|---|
| serial | 1 | 20 | 12 days |
| 12cpu | 2 ~ 12 | 120 | 8 days |
| 48cpu | 13 ~ 48 | 240 | 6 days |
| 192cpu | 49 ~ 192 | 768 | 5 days |
| 384cpu | 193 ~ 384 | 768 | 3 days |
| 768cpu | 385 ~ 768 | 1536 | 2 days |
| short | 128 | 128 | 2 days |
| medium | 128 | 128 | 6 days |
| long | 128 | 128 | 10 days |
All batch jobs must be submitted to a valid submit class. If the class doesn“t exist, job will be terminated and an error message will be issued.






